publications

publications by categories in reversed chronological order. generated by jekyll-scholar.

2026

  1. Mapping high-amplitude fMRI edge time series events across space and time
    Joshua Faskowitz, Peter A Bandettini, and Javier Gonzalez-Castillo
    Imaging Neuroscience, 2026
  2. Dynamic adaptation to novelty in the brain is related to arousal and intelligence
    Jacob Tanner, Joshua Faskowitz, Daniel P Kennedy, and 1 more author
    Cerebral Cortex, 2026
  3. Controlling the human connectome with spatially diffuse input signals
    Richard Betzel, Maria Grazia Puxeddu, Caio Seguin, and 8 more authors
    Communications biology, 2026
  4. Quantifying the compressibility of the human brain
    Nicholas J Weaver, Joshua Faskowitz, Richard F Betzel, and 1 more author
    Proceedings of the National Academy of Sciences, 2026
  5. Trait-Relevant Tasks Improve Personality Prediction From Structural-Functional Brain Network Coupling
    Johanna L Popp, Jonas A Thiele, Joshua Faskowitz, and 3 more authors
    Human Brain Mapping, 2026
  6. The Neural Code of Neuroticism
    Johanna L Popp, Martin Weiß, Joshua Faskowitz, and 1 more author
    bioRxiv, 2026

2025

  1. Decoding the human brain during intelligence testing
    Jonas A Thiele, Joshua Faskowitz, Olaf Sporns, and 3 more authors
    Communications Biology, 2025
  2. Variation in high-amplitude events across the human lifespan
    Youngheun Jo, Jacob Tanner, Caio Seguin, and 2 more authors
    Network Neuroscience, 2025
  3. Structural-functional brain network coupling during cognitive demand reveals intelligence-relevant communication strategies
    Johanna L Popp, Jonas A Thiele, Joshua Faskowitz, and 3 more authors
    Communications Biology, 2025
  4. Leveraging multivariate information for community detection in functional brain networks
    Maria Grazia Puxeddu, Maria Pope, Thomas F Varley, and 2 more authors
    Communications Biology, 2025
  5. Connectome architecture favours within-module diffusion and between-module routing
    Caio Seguin, Maria Grazia Puxeddu, Joshua Faskowitz, and 2 more authors
    bioRxiv, 2025
  6. Resting-State fMRI and the Risk of Overinterpretation: Noise, Mechanisms, and a Missing Rosetta Stone
    Gang Chen, Zhengchen Cai, Konrad P Kording, and 5 more authors
    bioRxiv, 2025
  7. Human cortex organizes dynamic co-fluctuations along sensation-association axis
    De-Zhi Jin, Changsong Zhou, Xi-Nian Zuo, and 3 more authors
    bioRxiv, 2025

2024

  1. Structural-functional brain network coupling predicts human cognitive ability
    Johanna L Popp, Jonas A Thiele, Joshua Faskowitz, and 3 more authors
    NeuroImage, 2024
  2. brainlife. io: a decentralized and open-source cloud platform to support neuroscience research
    Soichi Hayashi, Bradley A Caron, Anibal Sólon Heinsfeld, and 10 more authors
    Nature methods, 2024
  3. Relation of connectome topology to brain volume across 103 mammalian species
    Maria Grazia Puxeddu, Joshua Faskowitz, Caio Seguin, and 4 more authors
    Plos Biology, 2024
  4. Modular subgraphs in large-scale connectomes underpin spontaneous co-fluctuation events in mouse and human brains
    Elisabeth Ragone, Jacob Tanner, Youngheun Jo, and 6 more authors
    Communications Biology, 2024
  5. Functional hierarchies in brain dynamics characterized by signal reversibility in ferret cortex
    Sebastian Idesis, Sebastian Geli, Joshua Faskowitz, and 6 more authors
    PLOS Computational Biology, 2024
  6. Neuroanatomical changes observed over the course of a human pregnancy
    Laura Pritschet, Caitlin M Taylor, Daniela Cossio, and 7 more authors
    Nature Neuroscience, 2024
  7. Reliability of variability and complexity measures for task and task-free BOLD fMRI
    Maren H Wehrheim, Joshua Faskowitz, Anna-Lena Schubert, and 1 more author
    2024
  8. A multi-modal, asymmetric, weighted, and signed description of anatomical connectivity
    Jacob Tanner, Joshua Faskowitz, Andreia Sofia Teixeira, and 5 more authors
    Nature communications, 2024
  9. Stability and variation of brain-behavior correlation patterns across measures of social support
    Haily Merritt, Joshua Faskowitz, Marlen Z Gonzalez, and 1 more author
    Imaging Neuroscience, 2024
  10. Choosing explanation over performance: Insights from machine learning-based prediction of human intelligence from brain connectivity
    Jonas A Thiele, Joshua Faskowitz, Olaf Sporns, and 1 more author
    PNAS nexus, 2024

2023

  1. Stability of brain-behavior correlation patterns across measures of social support
    Haily Merritt, Joshua Faskowitz, Marlen Z Gonzalez, and 1 more author
    bioRxiv, 2023
  2. Synchronous high-amplitude co-fluctuations of functional brain networks during movie-watching
    Jacob C Tanner, Joshua Faskowitz, Lisa Byrge, and 3 more authors
    Imaging Neuroscience, 2023
  3. Hierarchical organization of spontaneous co-fluctuations in densely sampled individuals using fMRI
    Richard F Betzel, Sarah A Cutts, Jacob Tanner, and 4 more authors
    Network Neuroscience, 2023
  4. High-amplitude network co-fluctuations linked to variation in hormone concentrations over the menstrual cycle
    Sarah Greenwell, Joshua Faskowitz, Laura Pritschet, and 3 more authors
    Network Neuroscience, 2023
  5. A low dimensional embedding of brain dynamics enhances diagnostic accuracy and behavioral prediction in stroke
    Sebastian Idesis, Michele Allegra, Jakub Vohryzek, and 5 more authors
    Scientific Reports, 2023
  6. Living on the edge: network neuroscience beyond nodes
    Richard F Betzel, Joshua Faskowitz, and Olaf Sporns
    Trends in cognitive sciences, 2023
  7. Co-evolving dynamics and topology in a coupled oscillator model of resting brain function
    Maria Pope, Caio Seguin, Thomas F Varley, and 2 more authors
    NeuroImage, 2023
  8. Few temporally distributed brain connectivity states predict human cognitive abilities
    Maren H Wehrheim, Joshua Faskowitz, Olaf Sporns, and 3 more authors
    NeuroImage, 2023
  9. Partial entropy decomposition reveals higher-order information structures in human brain activity
    Thomas F Varley, Maria Pope, Puxeddu Maria Grazia, and 2 more authors
    Proceedings of the National Academy of Sciences, 2023
  10. Multivariate information theory uncovers synergistic subsystems of the human cerebral cortex
    Thomas F Varley, Maria Pope, Joshua Faskowitz, and 1 more author
    Communications biology, 2023
  11. Commentary on Pang et al.(2023) nature
    Joshua Faskowitz, Daniel Moyer, Daniel Handwerker, and 4 more authors
    bioRxiv, 2023

2022

  1. Uncovering individual differences in fine-scale dynamics of functional connectivity
    Sarah A Cutts, Joshua Faskowitz, Richard F Betzel, and 1 more author
    Cerebral Cortex (New York, NY: 1991), 2022
  2. Edge-centric analysis of stroke patients: An alternative approach for biomarkers of lesion recovery
    Sebastian Idesis, Joshua Faskowitz, Richard F Betzel, and 3 more authors
    NeuroImage: Clinical, 2022
  3. Individualized event structure drives individual differences in whole-brain functional connectivity
    Richard F Betzel, Sarah A Cutts, Sarah Greenwell, and 2 more authors
    NeuroImage, 2022
  4. Local structure-function relationships in human brain networks across the lifespan
    Farnaz Zamani Esfahlani, Joshua Faskowitz, Jonah Slack, and 2 more authors
    Nature communications, 2022
  5. Cortico-subcortical interactions in overlapping communities of edge functional connectivity
    Evgeny J Chumin, Joshua Faskowitz, Farnaz Zamani Esfahlani, and 7 more authors
    NeuroImage, 2022
  6. Effects of diffusion signal modeling and segmentation approaches on subthalamic nucleus parcellation
    Demetrio Milardi, Gianpaolo Antonio Basile, Joshua Faskowitz, and 6 more authors
    NeuroImage, 2022
  7. Multitask Brain Network Reconfiguration Is Inversely Associated with Human Intelligence.
    JA Thiele, J Faskowitz, O Sporns, and 1 more author
    Cerebral Cortex (New York, NY: 1991), 2022
  8. Multi-modal and multi-subject modular organization of human brain networks
    Maria Grazia Puxeddu, Joshua Faskowitz, Olaf Sporns, and 2 more authors
    NeuroImage, 2022
  9. Connectome topology of mammalian brains and its relationship to taxonomy and phylogeny
    Joshua Faskowitz, Maria Grazia Puxeddu, Martijn P Heuvel, and 5 more authors
    Frontiers in neuroscience, 2022
  10. Multi-policy models of interregional communication in the human connectome
    Richard Betzel, Joshua Faskowitz, Bratislav Misic, and 2 more authors
    bioRxiv, 2022
  11. System-level high-amplitude co-fluctuations
    Richard Betzel, Evgeny J Chumin, Farnaz Zamani Esfahlani, and 2 more authors
    bioRxiv, 2022

2021

  1. Association of immunosuppression and viral load with subcortical brain volume in an international sample of people living with HIV
    Talia M Nir, Jean-Paul Fouche, Jintanat Ananworanich, and 10 more authors
    JAMA network open, 2021
  2. Dynamic expression of brain functional systems disclosed by fine-scale analysis of edge time series
    Olaf Sporns, Joshua Faskowitz, Andreia Sofia Teixeira, and 2 more authors
    Network Neuroscience, 2021
  3. Collegiate athlete brain data for white matter mapping and network neuroscience
    Bradley Caron, Ricardo Stuck, Brent McPherson, and 8 more authors
    Scientific Data, 2021
  4. Subject identification using edge-centric functional connectivity
    Youngheun Jo, Joshua Faskowitz, Farnaz Zamani Esfahlani, and 2 more authors
    NeuroImage, 2021
  5. Mapping individual differences across brain network structure to function and behavior with connectome embedding
    Gidon Levakov, Joshua Faskowitz, Galia Avidan, and 1 more author
    NeuroImage, 2021
  6. Edges in brain networks: contributions to models of structure and function
    Joshua Faskowitz, Richard F Betzel, and Olaf Sporns
    Network Neuroscience, Aug 2021
    DOI
  7. Modularity maximization as a flexible and generic framework for brain network exploratory analysis
    Farnaz Zamani Esfahlani, Youngheun Jo, Maria Grazia Puxeddu, and 6 more authors
    NeuroImage, 2021
  8. The diversity and multiplexity of edge communities within and between brain systems
    Youngheun Jo, Farnaz Zamani Esfahlani, Joshua Faskowitz, and 3 more authors
    Cell reports, 2021
  9. An edge-centric model for harmonizing multi-relational network datasets
    *Joshua Faskowitz, *Jacob Tanner, Bratislav Misic, and 1 more author
    bioRxiv, 2021

2020

  1. Mapping the community structure of the rat cerebral cortex with weighted stochastic block modeling
    Joshua Faskowitz and Olaf Sporns
    Brain Structure and Function, 2020
  2. The reliability and heritability of cortical folds and their genetic correlations across hemispheres
    Fabrizio Pizzagalli, Guillaume Auzias, Qifan Yang, and 8 more authors
    Communications Biology, 2020
  3. Edge-centric functional network representations of human cerebral cortex reveal overlapping system-level architecture
    Joshua Faskowitz, Farnaz Zamani Esfahlani, Youngheun Jo, and 2 more authors
    Nature Neuroscience, 2020
  4. High-amplitude cofluctuations in cortical activity drive functional connectivity
    Farnaz Zamani Esfahlani, Youngheun Jo, Joshua Faskowitz, and 4 more authors
    Proceedings of the National Academy of Sciences, 2020
  5. Aging relates to a disproportionately weaker functional architecture of brain networks during rest and task states
    Colleen Hughes, Joshua Faskowitz, Brittany S Cassidy, and 2 more authors
    NeuroImage, 2020
  6. The modular organization of brain cortical connectivity across the human lifespan
    Maria Grazia Puxeddu, Joshua Faskowitz, Richard F Betzel, and 3 more authors
    NeuroImage, 2020

2019

  1. Age differences in specific neural connections within the Default Mode Network underlie theory of mind
    Colleen Hughes, Brittany S Cassidy, Joshua Faskowitz, and 3 more authors
    NeuroImage, 2019
  2. MULTI-SITE META-ANALYSIS OF MORPHOMETRY
    Neda Jahanshad, Joshua I Faskowitz, Gennady Roshchupkin, and 8 more authors
    IEEE/ACM transactions on computational biology and bioinformatics, 2019

2018

  1. Widespread white matter microstructural differences in schizophrenia across 4322 individuals: results from the ENIGMA Schizophrenia DTI Working Group
    Sinead Kelly, Neda Jahanshad, A Zalesky, and 10 more authors
    Molecular psychiatry, 2018
  2. Systemic inflammation as a predictor of brain aging: contributions of physical activity, metabolic risk, and genetic risk
    Fabian Corlier, George Hafzalla, Joshua Faskowitz, and 5 more authors
    Neuroimage, 2018
  3. Multisite metaanalysis of image-wide genome-wide associations with morphometry
    Neda Jahanshad, Gennady Roshchupkin, Joshua Faskowitz, and 8 more authors
    In Imaging Genetics, 2018
  4. The ENIGMA Cancer and Chemotherapy Working Group and Cancer-Related Cognitive Impairment (P6. 171)
    Mark Shiroishi, Vikash Gupta, Joshua Faskowitz, and 8 more authors
    2018
  5. Cortical brain abnormalities in 4474 individuals with schizophrenia and 5098 control subjects via the Enhancing Neuro Imaging Genetics Through Meta Analysis (ENIGMA) Consortium
    Theo GM Van Erp, Esther Walton, Derrek P Hibar, and 9 more authors
    Biological psychiatry, 2018
  6. Weighted Stochastic Block Models of the Human Connectome across the Life Span
    Joshua Faskowitz, Xiaoran Yan, Xi-Nian Zuo, and 1 more author
    Scientific reports, 2018
  7. Voxelwise meta-analysis of brain structural associations with genome-wide polygenic risk for Alzheimer’s disease
    Linda Ding, Alyssa H Zhu, Arvin Saremi, and 4 more authors
    In 14th International Symposium on Medical Information Processing and Analysis, 2018
  8. Sulcal-based morphometry in Parkinson’s disease: a study of reliability and disease effects
    Fabrizio Pizzagalli, Guillaume Auzias, Armand Amini, and 8 more authors
    In 14th International Symposium on Medical Information Processing and Analysis, 2018
  9. Genetic Connectivity–Correlated Genetic Control of Cortical Thickness, Brain Volume, and White Matter
    Daniel A Rinker, Neda Jahanshad, Derrek P Hibar, and 5 more authors
    In Imaging Genetics, 2018

2017

  1. Relationship of a common OXTR gene variant to brain structure and default mode network function in healthy humans
    Junping Wang, Meredith N Braskie, George W Hafzalla, and 6 more authors
    Neuroimage, 2017
  2. Utilizing brain measures for large-scale classification of autism applying EPIC
    Marc B Harrison, Brandalyn C Riedel, Gautam Prasad, and 3 more authors
    In 12th International Symposium on Medical Information Processing and Analysis, 2017
  3. The core genetic network underlying sulcal morphometry
    Fabrizio Pizzagalli, Guillaume Auzias, Peter Kochunov, and 3 more authors
    In 12th International Symposium on Medical Information Processing and Analysis, 2017
  4. Cortical connectome registration using spherical demons
    Dmitry Isaev, Boris A Gutman, Daniel Moyer, and 2 more authors
    In 12th International Symposium on Medical Information Processing and Analysis, 2017
  5. Structural connectome validation using pairwise classification
    Dmitry Petrov, Boris Gutman, Alexander Ivanov, and 4 more authors
    In 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), 2017
  6. Diverging volumetric trajectories following pediatric traumatic brain injury
    Emily L Dennis, Joshua Faskowitz, Faisal Rashid, and 8 more authors
    Neuroimage: clinical, 2017
  7. Continuous representations of brain connectivity using spatial point processes
    Daniel Moyer, Boris A Gutman, Joshua Faskowitz, and 2 more authors
    Medical image analysis, 2017
  8. Evaluating 35 methods to generate structural connectomes using pairwise classification
    Dmitry Petrov, Alexander Ivanov, Joshua Faskowitz, and 5 more authors
    In International Conference on medical Image Computing and Computer-Assisted Intervention, 2017
  9. A comparison of network definitions for detecting sex differences in brain connectivity using Support Vector Machines
    George W Hafzalla, Anjanibhargavi Ragothaman, Joshua Faskowitz, and 7 more authors
    In 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), 2017
  10. Mapping age effects along fiber tracts in young adults
    Emily L Dennis, Faisal Rashid, Josh Faskowitz, and 8 more authors
    In 2017 IEEE 14th International Symposium on Biomedical Imaging (ISBI 2017), 2017
  11. Classifying phenotypes based on the community structure of human brain networks
    Anvar Kurmukov, Marina Ananyeva, Yulia Dodonova, and 5 more authors
    In Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics, 2017
  12. Simultaneous Matrix Diagonalization for Structural Brain Networks Classification
    Nikita Mokrov, Maxim Panov, Boris A Gutman, and 3 more authors
    In International Conference on Complex Networks and their Applications, 2017
  13. Do Candidate Genes Affect the Brain’s White Matter Microstructure? Large-Scale Evaluation of 6,165 Diffusion MRI Scans
    Neda Jahanshad, Habib Ganjgahi, Janita Bralten, and 8 more authors
    BioRxiv, 2017

2016

  1. Heritability and reliability of automatically segmented human hippocampal formation subregions
    Christopher D Whelan, Derrek P Hibar, Laura S Velzen, and 8 more authors
    Neuroimage, 2016
  2. Subcortical volumetric abnormalities in bipolar disorder
    DP Hibar, Lars T Westlye, Theo GM Erp, and 8 more authors
    Molecular psychiatry, 2016
  3. The heritability of the functional connectome is robust to common nonlinear registration methods
    George W Hafzalla, Gautam Prasad, Vatche G Baboyan, and 7 more authors
    In Medical Imaging 2016: Image Processing, 2016
  4. Embedded sparse representation of fMRI data via group-wise dictionary optimization
    Dajiang Zhu, Binbin Lin, Joshua Faskowitz, and 2 more authors
    In Medical Imaging 2016: Image Processing, 2016
  5. Comparison of template registration methods for multi-site meta-analysis of brain morphometry
    Joshua Faskowitz, Greig I Zubicaray, Katie L McMahon, and 3 more authors
    In Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, 2016
  6. Genetic analysis of cortical sulci in 1,009 adults
    Fabrizio Pizzagalli, Guillaume Auzias, Peter Kochunov, and 7 more authors
    In 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016
  7. Population learning of structural connectivity by white matter encoding and decoding
    Dajiang Zhu, Neda Jahanshad, Brandalyn C Riedel, and 4 more authors
    In 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI), 2016
  8. A continuous model of cortical connectivity
    Daniel Moyer, Boris A Gutman, Joshua Faskowitz, and 2 more authors
    In International Conference on Medical Image Computing and Computer-Assisted Intervention, 2016
  9. Partitioning heritability analysis reveals a shared genetic basis of brain anatomy and schizophrenia
    Phil H Lee, Justin T Baker, Avram J Holmes, and 8 more authors
    Molecular psychiatry, 2016
  10. Multi-modal registration improves group discrimination in pediatric traumatic brain injury
    Emily L Dennis, Faisal Rashid, Julio Villalon-Reina, and 8 more authors
    In International Workshop on Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2016
  11. Using Geometry of the Set of Symmetric Positive Semidefinite Matrices to Classify Structural Brain Networks
    Mikhail Belyaev, Yulia Dodonova, Daria Belyaeva, and 5 more authors
    In International Conference on Network Analysis, 2016
  12. Topological Modules of Human Brain Networks Are Anatomically Embedded: Evidence from Modularity Analysis at Multiple Scales
    Anvar Kurmukov, Yulia Dodonova, Margarita Burova, and 4 more authors
    In International Conference on Network Analysis, 2016
  13. An Empirical Study of Continuous Connectivity Degree Sequence Equivalents
    Daniel Moyer, Boris A. Gutman, Joshua Faskowitz, and 2 more authors
    arXiv, 2016

2015

  1. Heritability of brain network topology in 853 twins and siblings
    Liang Zhan, Neda Jahanshad, Joshua Faskowitz, and 7 more authors
    In 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), 2015
  2. Genetic analysis of structural brain connectivity using DICCCOL models of diffusion MRI in 522 twins
    Dajiang Zhu, Liang Zhan, Joshua Faskowitz, and 7 more authors
    In 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), 2015
  3. Blockmodels for connectome analysis
    Daniel Moyer, Boris Gutman, Gautam Prasad, and 3 more authors
    In 11th International Symposium on Medical Information Processing and Analysis, 2015

  1. Time-varying synergy/redundancy dominance in the human cerebral cortex
    Maria Pope, Thomas F Varley, Maria Grazia Puxeddu, and 2 more authors
    Journal of Physics: Complexity